iDISCO vs. SmartBatch+ Workflow

Thinking about using iDISCO?

A highly streamlined workflow distinguishes SmartBatch+ tissue clearing and labeling from homebrew approaches like iDISCO. SmartBatch+ allows you to process batches of up to 12 mouse brains in as little as 1 day with minimal hands-on time.

Forget dehydration and rehydration series

The SmartBatch+ workflow consists of all-aqueous reagents, avoiding time-consuming and laborious dehydration and rehydration steps.

Label-free endogenous fluorescence

Fluorescent proteins that would typically be quenched by iDISCO solvents are instead preserved with SHIELD. Consequently, with SmartBatch+, immunolabeling is not strictly necessary to visualize fluorescent proteins.

Explore a rainbow of clear, vivid endogenously-tagged fluorophores in various sample and tissue types with our highly compatible tissue clearing technology. Effectively process spine, liver, lung, skin, and much more.

Fast, uniform immunolabeling

Where immunolabeling is required, SmartBatch+ leverages stochastic electrotransport technology to enable rapid labeling of large samples. Whole rat brains can be labeled in 2-3 days in contrast to the several months required with passive techniques like iDISCO.

Unlike iDISCO labeling, SmartBatch+ also ensures that targets are uniformly labelled throughout the sample. We are constantly validating antibodies for popular targets related to neuroscience, cancer, development, and disease.

Recent publications citing SmartBatch+

Distinct neurogenic pathways shape the diversification and mosaic organization of cortical output channels

Shreyas M. Suryanarayana, Xu An, Yongjun Qian, Shengli Zhao, Hemanth Mohan, Z. Josh Huang

Journal:
Neuron
Publication Date:
Research Area:
Neural Circuits
Tissue Species:
Mouse
Tissue Type:
Brain
Products Cited:
SHIELD, EasyIndex, SmartBatch+, SmartSPIM, CRO Services
Microvascular architecture and dynamics of the choroid plexus brain barrier

Samantha Kuszynski, Ian Junker, Shristi Shrestha, Alexander Brand, Paige Pfotenhauer, Oleg Kovtun, Ryan Moran, Chloe Koo, Carson Oakes, José Maldonado, Jean-Phillipe Cartailler, Alex Tiriac, Neil Dani

Journal:
bioRxiv
Publication Date:
Research Area:
Vasculature
Tissue Species:
Mouse
Tissue Type:
Brain
Products Cited:
SHIELD, SmartBatch+, SmartSPIM
Brain-wide mapping and synaptic localization of C1QL3 using a novel epitope-tagged knock-in mouse

William P. Armstrong IV, James M. Salvatore, Matthew J. Sticco, Keaven Caro, J. Wesley Maddox, Angie Huang, Brenna C. McAllister, Christopher O’Connell, Siu-Pok Yee, Amy Lee, Susanne Ressl, David C. Martinelli, Alexander C. Jackson

Journal:
biorXiv
Publication Date:
Tissue Species:
Mouse
Tissue Type:
Brain
Products Cited:
SHIELD, EasyIndex, SmartBatch+, SmartSPIM, SmartAnalytics, CRO Services, Radiant

Speak to an expert about your application

Do you have questions about your specific project or application, or just want to learn more about our technology? Reach out to our dedicated team of expert technicians and PhD scientists. We look forward to helping you expedite new discoveries.

Further reading

LifeCanvas Portraits: Dr. Mike Taormina

Dr. Mike Taormina uses SmartSPIM light sheet microscopy to rapidly image whole mouse brains, streamlining workflows at the Allen Institute.